Yeah, I gather that she is thinking long term about whether our life will be better or worse if I apply the scientific method to my faith.
Her family wouldn't disown her, but her parents would be somewhat disappointed. But mostly my wife feels scared and is afraid something bad will happen if I don't repent and keep following the commandments that I am doubting. I am still on the fence, I guess. I thought about not paying tithing (10% of my income) for a year or so to see what happened as far as blessings go, and she got very scared. The LDS church does teach that it is important to use reason and understand why you are being obedient, but she somehow hasn't learned that doctrine, yet, somehow... Work in progress, I guess.
I'll keep you all posted. I might call in in a week or two if I need to. Thanks all!